# Documentation for ICEStrValues

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XML Instance Representation:
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Schema Component Representation:
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## Table of Contents

- Schema Document Properties
- Global Declarations
  - Element: ICEFormat
- Global Definitions
  - Complex Type: BasicFeatureInfo
  - Complex Type: BooleanFeatureInfo
  - Complex Type: ChannelDefinitionsType
  - Complex Type: ChannelType
  - Complex Type: ClassificationFeatureInfo
  - Complex Type: CompositeImageData
  - Complex Type: CompositeImageFeatureInfo
  - Complex Type: CompositeImagesType
  - Complex Type: CustomPlateLayoutType
  - Complex Type: DataSetType
  - Complex Type: FeatureDefinitionType
  - Complex Type: FeatureDefinitionsType
  - Complex Type: FeatureValue
  - Complex Type: FeatureValueType
  - Complex Type: FeatureValuesType
  - Complex Type: FloatFeatureInfo
  - Complex Type: GridSiteType
  - Complex Type: GridType
  - Complex Type: ICEFormatType
  - Complex Type: ImageFeatureInfo
  - Complex Type: ImageType
  - Complex Type: IndividualImageData
  - Complex Type: IndividualImageFeatureInfo
  - Complex Type: IntFeatureInfo
  - Complex Type: MaskType
  - Complex Type: MasksType
  - Complex Type: MetaDataType
  - Complex Type: PlateLayoutType
  - Complex Type: PlateType
  - Complex Type: PositionSiteType
  - Complex Type: PositionType
  - Complex Type: PrimitiveTypeFeatureValue
  - Complex Type: ResourceType
  - Complex Type: SegmentationDefinitionsType
  - Complex Type: SegmentationType
  - Complex Type: SitemapType
  - Complex Type: StringFeatureInfo
  - Complex Type: TimedeltaType
  - Complex Type: TimestampType
  - Complex Type: WellType
  - Complex Type: Z-positionType
  - Complex Type: Z-positionValueType
  - Simple Type: IDType
  - Simple Type: LUnitsOrPixelType
  - Simple Type: LUnitsType
  - Simple Type: PosInt
  - Simple Type: StandardPlateLayoutType
  - Simple Type: TUnitsType

- Legend

- Glossary

#### Master schema documentation file: ICEStrValues.xsd.html

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## Schema Document Properties

Target Namespace | http://www.isac-net.org/std/ICEFormat/1.0/ice
Version | 20110601
Element and Attribute Namespaces | Global element and attribute declarations belong to this schema's target namespace. By default, local element declarations belong to this schema's target namespace. By default, local attribute declarations have no namespace.
Application Data | ICEFormat - The Image Cytometry Experiment Format

### Declared Namespaces

Prefix | Namespace
--- | ---
Default namespace | http://www.isac-net.org/std/ICEFormat/1.0/ice
xml | http://www.w3.org/XML/1998/namespace
xs | http://www.w3.org/2001/XMLSchema

Schema Component Representation
<xs:schema elementFormDefault="qualified" targetNamespace="http://www.isac-net.org/std/ICEFormat/1.0/ice" version="20110601">
...
</xs:schema>
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## Global Declarations

### Element: ICEFormat

Name | ICEFormat
Type | ICEFormatType
Nillable | no
Abstract | no

Logical Diagram
XML Instance Representation
<ICEFormat
version="1.0 [1]">
<ChannelDefinitions> ChannelDefinitionsType </ChannelDefinitions> [0..1]
<SegmentationDefinitions> SegmentationDefinitionsType </SegmentationDefinitions> [0..1]
<FeatureDefinitions> FeatureDefinitionsType </FeatureDefinitions> [0..1]
Start Choice [1]
<DataSet> DataSetType </DataSet> [1..*]
<Plate> PlateType </Plate> [1..*]
End Choice
<Sitemap> SitemapType </Sitemap> [0..1]
</ICEFormat>
Diagram
Schema Component Representation
<xs:element name="ICEFormat" type=" ICEFormatType "/>
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## Global Definitions

### Complex Type: BasicFeatureInfo

Super-types: | None
Sub-types: | IntFeatureInfo (by extension) ClassificationFeatureInfo (by extension) FloatFeatureInfo (by extension) BooleanFeatureInfo (by extension) ImageFeatureInfo (by extension) IndividualImageFeatureInfo (by extension) CompositeImageFeatureInfo (by extension) StringFeatureInfo (by extension)

Name | BasicFeatureInfo
Abstract | yes

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="BasicFeatureInfo" abstract="true">
<xs:sequence>
<xs:element name="Description" type=" xs:string "/>
<xs:element name="ID" type=" IDType "/>
</xs:sequence>
</xs:complexType>
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### Complex Type: BooleanFeatureInfo

Super-types: | BasicFeatureInfo < BooleanFeatureInfo (by extension)
Sub-types: | None

Name | BooleanFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<BitDepth> xs:int (value comes from list: {'8'}) </BitDepth> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="BooleanFeatureInfo">
<xs:complexContent>
<xs:extension base=" BasicFeatureInfo ">
<xs:sequence>
<xs:element name="BitDepth">
<xs:simpleType>
<xs:restriction base=" xs:int ">
<xs:enumeration value="8"/>
</xs:restriction>
</xs:simpleType>
</xs:element>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: ChannelDefinitionsType

Super-types: | None
Sub-types: | None

Name | ChannelDefinitionsType
Used by (from the same schema document) | Complex Type ICEFormatType
Abstract | no

XML Instance Representation
<...>
<Channel> ChannelType </Channel> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="ChannelDefinitionsType">
<xs:sequence>
<xs:element name="Channel" type=" ChannelType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: ChannelType

Super-types: | xs:anyType < ChannelType (by extension)
Sub-types: | None

Name | ChannelType
Used by (from the same schema document) | Complex Type ChannelDefinitionsType
Abstract | no

XML Instance Representation
<...
Id=" IDType [1]"
Description=" xs:string [0..1]">
<!-- ' xs:anyType' super type was not found in this schema. Some elements and attributes may be missing. -->
</...>
Diagram
Schema Component Representation
<xs:complexType name="ChannelType">
<xs:complexContent>
<xs:extension base=" xs:anyType ">
<xs:attribute name="Id" type=" IDType " use="required"/>
<xs:attribute name="Description" type=" xs:string " use="optional"/>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: ClassificationFeatureInfo

Super-types: | BasicFeatureInfo < IntFeatureInfo (by extension) < ClassificationFeatureInfo (by extension)
Sub-types: | None

Name | ClassificationFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<BitDepth> xs:int (value comes from list: {'8'|'16'|'32'}) </BitDepth> [1]
<Class> xs:string </Class> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="ClassificationFeatureInfo">
<xs:complexContent>
<xs:extension base=" IntFeatureInfo ">
<xs:sequence>
<xs:element name="Class" type=" xs:string " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: CompositeImageData

Super-types: | FeatureValue < CompositeImageData (by extension)
Sub-types: | None

Name | CompositeImageData
Used by (from the same schema document) | Complex Type FeatureValueType
Abstract | no

XML Instance Representation
<...>
<FeatureID> IDType </FeatureID> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="CompositeImageData">
<xs:complexContent>
<xs:extension base=" FeatureValue "/>
</xs:complexContent>
</xs:complexType>
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### Complex Type: CompositeImageFeatureInfo

Super-types: | BasicFeatureInfo < ImageFeatureInfo (by extension) < CompositeImageFeatureInfo (by extension)
Sub-types: | None

Name | CompositeImageFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<ChannelID> IDType </ChannelID> [0..1]
<ImageID> IDType </ImageID> [1..*]

'If you want to apply the same mask to multiple images, you can include the multiple images in the list here.'

<MaskID> IDType </MaskID> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="CompositeImageFeatureInfo">
<xs:complexContent>
<xs:extension base=" ImageFeatureInfo ">
<xs:sequence>
<xs:element name="ImageID" type=" IDType " minOccurs="1" maxOccurs="unbounded"/>
<xs:element name="MaskID" type=" IDType "/>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: CompositeImagesType

Super-types: | None
Sub-types: | None

Name | CompositeImagesType
Used by (from the same schema document) | Complex Type DataSetType
Abstract | no

XML Instance Representation
<...>
<Image> ImageType </Image> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="CompositeImagesType">
<xs:sequence>
<xs:element name="Image" type=" ImageType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: CustomPlateLayoutType

Super-types: | None
Sub-types: | None

Name | CustomPlateLayoutType
Used by (from the same schema document) | Complex Type PlateLayoutType
Abstract | no

XML Instance Representation
<...>
<Rows> PosInt </Rows> [1]
<Columns> PosInt </Columns> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="CustomPlateLayoutType">
<xs:sequence>
<xs:element name="Rows" type=" PosInt "/>
<xs:element name="Columns" type=" PosInt "/>
</xs:sequence>
</xs:complexType>
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### Complex Type: DataSetType

Super-types: | None
Sub-types: | None

Name | DataSetType
Used by (from the same schema document) | Complex Type ICEFormatType , Complex Type WellType
Abstract | no

XML Instance Representation
<...
SiteRef=" IDType [0..1]">
<MetaData> MetaDataType </MetaData> [1]
<FeatureDefinitions> FeatureDefinitionsType </FeatureDefinitions> [0..1]
<CompositeImages> CompositeImagesType </CompositeImages> [0..1]
<Masks> MasksType </Masks> [0..1]
<FeatureValues> FeatureValuesType </FeatureValues> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="DataSetType">
<xs:sequence>
<xs:element name="MetaData" type=" MetaDataType " minOccurs="1" maxOccurs="1"/>
<xs:element name="FeatureDefinitions" type=" FeatureDefinitionsType " minOccurs="0" maxOccurs="1"/>
<xs:element name="CompositeImages" type=" CompositeImagesType " minOccurs="0" maxOccurs="1"/>
<xs:element name="Masks" type=" MasksType " minOccurs="0" maxOccurs="1"/>
<xs:element name="FeatureValues" type=" FeatureValuesType " minOccurs="1" maxOccurs="1"/>
</xs:sequence>
<xs:attribute name="SiteRef" type=" IDType " use="optional"/>
</xs:complexType>
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### Complex Type: FeatureDefinitionType

Super-types: | None
Sub-types: | None

Name | FeatureDefinitionType
Used by (from the same schema document) | Complex Type FeatureDefinitionsType
Abstract | no

XML Instance Representation
<...>
Start Choice [1]
<InfoInt> IntFeatureInfo </InfoInt> [1]
<InfoFloat> FloatFeatureInfo </InfoFloat> [1]
<InfoBoolean> BooleanFeatureInfo </InfoBoolean> [1]
<InfoCompositeImage> CompositeImageFeatureInfo </InfoCompositeImage> [1]
<InfoIndividualImage> IndividualImageFeatureInfo </InfoIndividualImage> [1]
<InfoString> StringFeatureInfo </InfoString> [1]
<InfoClassification> ClassificationFeatureInfo </InfoClassification> [1]
<InfoAssociation> IntFeatureInfo </InfoAssociation> [1]
End Choice
</...>
Diagram
Schema Component Representation
<xs:complexType name="FeatureDefinitionType">
<xs:choice>
<xs:element name="InfoInt" type=" IntFeatureInfo "/>
<xs:element name="InfoFloat" type=" FloatFeatureInfo "/>
<xs:element name="InfoBoolean" type=" BooleanFeatureInfo "/>
<xs:element name="InfoCompositeImage" type=" CompositeImageFeatureInfo "/>
<xs:element name="InfoIndividualImage" type=" IndividualImageFeatureInfo "/>
<xs:element name="InfoString" type=" StringFeatureInfo "/>
<xs:element name="InfoClassification" type=" ClassificationFeatureInfo "/>
<xs:element name="InfoAssociation" type=" IntFeatureInfo "/>
</xs:choice>
</xs:complexType>
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### Complex Type: FeatureDefinitionsType

Super-types: | None
Sub-types: | None

Name | FeatureDefinitionsType
Used by (from the same schema document) | Complex Type ICEFormatType , Complex Type DataSetType
Abstract | no

XML Instance Representation
<...>
<FeatureDefinition> FeatureDefinitionType </FeatureDefinition> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="FeatureDefinitionsType">
<xs:sequence>
<xs:element name="FeatureDefinition" type=" FeatureDefinitionType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: FeatureValue

Super-types: | None
Sub-types: | PrimitiveTypeFeatureValue (by extension) CompositeImageData (by extension)

Name | FeatureValue
Abstract | yes

XML Instance Representation
<...>
<FeatureID> IDType </FeatureID> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="FeatureValue" abstract="true">
<xs:sequence>
<xs:element name="FeatureID" type=" IDType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: FeatureValueType

Super-types: | None
Sub-types: | None

Name | FeatureValueType
Used by (from the same schema document) | Complex Type FeatureValuesType
Abstract | no

XML Instance Representation
<...>
Start Choice [1]
<Primitive> PrimitiveTypeFeatureValue </Primitive> [1]
<IndividualImage> IndividualImageData </IndividualImage> [1]
<CompositeImage> CompositeImageData </CompositeImage> [1]
End Choice
</...>
Diagram
Schema Component Representation
<xs:complexType name="FeatureValueType">
<xs:choice>
<xs:element name="Primitive" type=" PrimitiveTypeFeatureValue "/>
<xs:element name="IndividualImage" type=" IndividualImageData "/>
<xs:element name="CompositeImage" type=" CompositeImageData "/>
</xs:choice>
</xs:complexType>
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### Complex Type: FeatureValuesType

Super-types: | None
Sub-types: | None

Name | FeatureValuesType
Used by (from the same schema document) | Complex Type DataSetType
Abstract | no

XML Instance Representation
<...>
<FeatureValue> FeatureValueType </FeatureValue> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="FeatureValuesType">
<xs:sequence>
<xs:element name="FeatureValue" type=" FeatureValueType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: FloatFeatureInfo

Super-types: | BasicFeatureInfo < FloatFeatureInfo (by extension)
Sub-types: | None

Name | FloatFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<BitDepth> xs:int (value comes from list: {'32'|'64'}) </BitDepth> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="FloatFeatureInfo">
<xs:complexContent>
<xs:extension base=" BasicFeatureInfo ">
<xs:sequence>
<xs:element name="BitDepth">
<xs:simpleType>
<xs:restriction base=" xs:int ">
<xs:enumeration value="32"/>
<xs:enumeration value="64"/>
</xs:restriction>
</xs:simpleType>
</xs:element>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: GridSiteType

Super-types: | None
Sub-types: | None

Name | GridSiteType
Used by (from the same schema document) | Complex Type GridType
Abstract | no

XML Instance Representation
<...
ID=" IDType [1]"
Row=" PosInt [1]"
Column=" PosInt [1]"/>
Diagram
Schema Component Representation
<xs:complexType name="GridSiteType">
<xs:attribute name="ID" type=" IDType " use="required"/>
<xs:attribute name="Row" type=" PosInt " use="required"/>
<xs:attribute name="Column" type=" PosInt " use="required"/>
</xs:complexType>
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### Complex Type: GridType

Super-types: | None
Sub-types: | None

Name | GridType
Used by (from the same schema document) | Complex Type SitemapType
Abstract | no

XML Instance Representation
<...>
<Rows> PosInt </Rows> [1]
<Columns> PosInt </Columns> [1]
<Site> GridSiteType </Site> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="GridType">
<xs:sequence>
<xs:element name="Rows" type=" PosInt " minOccurs="1" maxOccurs="1"/>
<xs:element name="Columns" type=" PosInt " minOccurs="1" maxOccurs="1"/>
<xs:element name="Site" type=" GridSiteType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: ICEFormatType

Super-types: | None
Sub-types: | None

Name | ICEFormatType
Used by (from the same schema document) | Element ICEFormat
Abstract | no

XML Instance Representation
<...
version="1.0 [1]">
<ChannelDefinitions> ChannelDefinitionsType </ChannelDefinitions> [0..1]
<SegmentationDefinitions> SegmentationDefinitionsType </SegmentationDefinitions> [0..1]
<FeatureDefinitions> FeatureDefinitionsType </FeatureDefinitions> [0..1]
Start Choice [1]
<DataSet> DataSetType </DataSet> [1..*]
<Plate> PlateType </Plate> [1..*]
End Choice
<Sitemap> SitemapType </Sitemap> [0..1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="ICEFormatType">
<xs:sequence>
<xs:element name="ChannelDefinitions" type=" ChannelDefinitionsType " minOccurs="0" maxOccurs="1"/>
<xs:element name="SegmentationDefinitions" type=" SegmentationDefinitionsType " minOccurs="0" maxOccurs="1"/>
<xs:element name="FeatureDefinitions" type=" FeatureDefinitionsType " minOccurs="0" maxOccurs="1"/>
<xs:choice>
<xs:element name="DataSet" type=" DataSetType " maxOccurs="unbounded"/>
<xs:element name="Plate" type=" PlateType " maxOccurs="unbounded"/>
</xs:choice>
<xs:element name="Sitemap" type=" SitemapType " minOccurs="0" maxOccurs="1"/>
</xs:sequence>
<xs:attribute name="version" type=" xs:string " fixed="1.0" use="required"/>
</xs:complexType>
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### Complex Type: ImageFeatureInfo

Super-types: | BasicFeatureInfo < ImageFeatureInfo (by extension)
Sub-types: | IndividualImageFeatureInfo (by extension) CompositeImageFeatureInfo (by extension)

Name | ImageFeatureInfo
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<ChannelID> IDType </ChannelID> [0..1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="ImageFeatureInfo">
<xs:complexContent>
<xs:extension base=" BasicFeatureInfo ">
<xs:sequence>
<xs:element name="ChannelID" type=" IDType " minOccurs="0" maxOccurs="1"/>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: ImageType

Super-types: | ResourceType < ImageType (by extension)
Sub-types: | MaskType (by extension)

Name | ImageType
Used by (from the same schema document) | Complex Type CompositeImagesType
Abstract | no

XML Instance Representation
<...>
<ID> IDType </ID> [1]
<URL> xs:anyURI </URL> [1]
<Width> PosInt </Width> [1]
<Height> PosInt </Height> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="ImageType">
<xs:complexContent>
<xs:extension base=" ResourceType ">
<xs:sequence>
<xs:element name="Width" type=" PosInt "/>
<xs:element name="Height" type=" PosInt "/>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: IndividualImageData

Super-types: | None
Sub-types: | None

Name | IndividualImageData
Used by (from the same schema document) | Complex Type FeatureValueType
Abstract | no

XML Instance Representation
<...>
<FeatureID> IDType </FeatureID> [1]
<URL> xs:anyURI </URL> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="IndividualImageData">
<xs:sequence>
<xs:element name="FeatureID" type=" IDType "/>
<xs:element name="URL" type=" xs:anyURI " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: IndividualImageFeatureInfo

Super-types: | BasicFeatureInfo < ImageFeatureInfo (by extension) < IndividualImageFeatureInfo (by extension)
Sub-types: | None

Name | IndividualImageFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<ChannelID> IDType </ChannelID> [0..1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="IndividualImageFeatureInfo">
<xs:complexContent>
<xs:extension base=" ImageFeatureInfo ">
<-- Not sure if anythink is needed here -->
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: IntFeatureInfo

Super-types: | BasicFeatureInfo < IntFeatureInfo (by extension)
Sub-types: | ClassificationFeatureInfo (by extension)

Name | IntFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType , Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
<BitDepth> xs:int (value comes from list: {'8'|'16'|'32'}) </BitDepth> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="IntFeatureInfo">
<xs:complexContent>
<xs:extension base=" BasicFeatureInfo ">
<xs:sequence>
<xs:element name="BitDepth">
<xs:simpleType>
<xs:restriction base=" xs:int ">
<xs:enumeration value="8"/>
<xs:enumeration value="16"/>
<xs:enumeration value="32"/>
</xs:restriction>
</xs:simpleType>
</xs:element>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: MaskType

Super-types: | ResourceType < ImageType (by extension) < MaskType (by extension)
Sub-types: | None

Name | MaskType
Used by (from the same schema document) | Complex Type MasksType
Abstract | no
Documentation | A mask is described by an Id, URL, width (in pixels), height (in pixels), bit depth and mask object numbers. The Id is a unique identifier of the mask. The URL is a pointer to binary file storing the mask. The width and height of the mask shall correspond to the width and height of the image that the mask will be applied to. The bit depth specifies the number of bits used for each pixel in the mask, it shall be 8, 16 or 32. An 8 bit mask allows for encoding up to 255 objects, a 16-bit mask 65535 objects and a 32 bit mask 4294967295 objects. The mask object numbers enumerate the identifiers of objects present in the mask; these shall be positive values leaving 0 for background. If mask object numbers are not specified, they are assumed to go sequentially from 1 to n, where n is the number of objects specified in the metadata section in the XML. See specification (ICEFormat.v1.0.pdf) for information about the format of the binary file storing the mask.

XML Instance Representation
<...>
<ID> IDType </ID> [1]
<URL> xs:anyURI </URL> [1]
<Width> PosInt </Width> [1]
<Height> PosInt </Height> [1]
<BitDepth> xs:int (value comes from list: {'8'|'16'|'32'}) </BitDepth> [1]
<SegmentationID> IDType </SegmentationID> [0..1]
<MaskObjectNumber> PosInt </MaskObjectNumber> [0..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="MaskType">
<xs:complexContent>
<xs:extension base=" ImageType ">
<xs:sequence>
<xs:element name="BitDepth">
<xs:simpleType>
<xs:restriction base=" xs:int ">
<xs:enumeration value="8"/>
<xs:enumeration value="16"/>
<xs:enumeration value="32"/>
</xs:restriction>
</xs:simpleType>
</xs:element>
<xs:element name="SegmentationID" type=" IDType " minOccurs="0" maxOccurs="1"/>
<xs:element name="MaskObjectNumber" type=" PosInt " minOccurs="0" maxOccurs="unbounded"/>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: MasksType

Super-types: | None
Sub-types: | None

Name | MasksType
Used by (from the same schema document) | Complex Type DataSetType
Abstract | no

XML Instance Representation
<...>
<Mask> MaskType </Mask> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="MasksType">
<xs:sequence>
<xs:element name="Mask" type=" MaskType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: MetaDataType

Super-types: | None
Sub-types: | None

Name | MetaDataType
Used by (from the same schema document) | Complex Type DataSetType
Abstract | no

XML Instance Representation
<...>
<NumberOfObjects> PosInt </NumberOfObjects> [1]
<Timestamp> TimestampType </Timestamp> [0..1]
<Z-position> Z-positionType </Z-position> [0..1]
<Custom> xs:anyType </Custom> [0..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="MetaDataType">
<xs:sequence>
<xs:element name="NumberOfObjects" type=" PosInt "/>
<xs:element name="Timestamp" type=" TimestampType " minOccurs="0" maxOccurs="1"/>
<xs:element name="Z-position" type=" Z-positionType " minOccurs="0" maxOccurs="1"/>
<xs:element name="Custom" type=" xs:anyType " minOccurs="0" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: PlateLayoutType

Super-types: | None
Sub-types: | None

Name | PlateLayoutType
Used by (from the same schema document) | Complex Type PlateType
Abstract | no

XML Instance Representation
<...>
Start Choice [1]
<Standard> StandardPlateLayoutType </Standard> [1]
<Custom> CustomPlateLayoutType </Custom> [1]
End Choice
</...>
Diagram
Schema Component Representation
<xs:complexType name="PlateLayoutType">
<xs:choice>
<xs:element name="Standard" type=" StandardPlateLayoutType "/>
<xs:element name="Custom" type=" CustomPlateLayoutType "/>
</xs:choice>
</xs:complexType>
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### Complex Type: PlateType

Super-types: | None
Sub-types: | None

Name | PlateType
Used by (from the same schema document) | Complex Type ICEFormatType
Abstract | no

XML Instance Representation
<...
Id=" IDType [0..1]">
<Layout> PlateLayoutType </Layout> [1]
<Well> WellType </Well> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="PlateType">
<xs:sequence>
<xs:element name="Layout" type=" PlateLayoutType "/>
<xs:element name="Well" type=" WellType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
<xs:attribute name="Id" type=" IDType " use="optional"/>
</xs:complexType>
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### Complex Type: PositionSiteType

Super-types: | None
Sub-types: | None

Name | PositionSiteType
Used by (from the same schema document) | Complex Type PositionType
Abstract | no

XML Instance Representation
<...
ID=" IDType [1]"
Left=" xs:double [0..1]"
Right=" xs:double [0..1]"
Top=" xs:double [0..1]"
Bottom=" xs:double [0..1]"/>
Diagram
Schema Component Representation
<xs:complexType name="PositionSiteType">
<xs:attribute name="ID" type=" IDType " use="required"/>
<xs:attribute name="Left" type=" xs:double " use="optional"/>
<xs:attribute name="Right" type=" xs:double " use="optional"/>
<xs:attribute name="Top" type=" xs:double " use="optional"/>
<xs:attribute name="Bottom" type=" xs:double " use="optional"/>
</xs:complexType>
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### Complex Type: PositionType

Super-types: | None
Sub-types: | None

Name | PositionType
Used by (from the same schema document) | Complex Type SitemapType
Abstract | no

XML Instance Representation
<...>
<Units> LUnitsOrPixelType </Units> [0..1]
<Width> xs:double </Width> [0..1]
<Height> xs:double </Height> [0..1]
<Site> PositionSiteType </Site> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="PositionType">
<xs:sequence>
<xs:element name="Units" type=" LUnitsOrPixelType " minOccurs="0" maxOccurs="1"/>
<xs:element name="Width" type=" xs:double " minOccurs="0" maxOccurs="1"/>
<xs:element name="Height" type=" xs:double " minOccurs="0" maxOccurs="1"/>
<xs:element name="Site" type=" PositionSiteType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: PrimitiveTypeFeatureValue

Super-types: | FeatureValue < PrimitiveTypeFeatureValue (by extension)
Sub-types: | None

Name | PrimitiveTypeFeatureValue
Used by (from the same schema document) | Complex Type FeatureValueType
Abstract | no

XML Instance Representation
<...>
<FeatureID> IDType </FeatureID> [1..*]
<URL> xs:anyURI </URL> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="PrimitiveTypeFeatureValue">
<xs:complexContent>
<xs:extension base=" FeatureValue ">
<xs:sequence>
<xs:element name="URL" type=" xs:anyURI "/>
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: ResourceType

Super-types: | None
Sub-types: | ImageType (by extension) MaskType (by extension)

Name | ResourceType
Abstract | no

XML Instance Representation
<...>
<ID> IDType </ID> [1]
<URL> xs:anyURI </URL> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="ResourceType">
<xs:sequence>
<xs:element name="ID" type=" IDType "/>
<xs:element name="URL" type=" xs:anyURI "/>
</xs:sequence>
</xs:complexType>
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### Complex Type: SegmentationDefinitionsType

Super-types: | None
Sub-types: | None

Name | SegmentationDefinitionsType
Used by (from the same schema document) | Complex Type ICEFormatType
Abstract | no

XML Instance Representation
<...>
<Segmentation> SegmentationType </Segmentation> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="SegmentationDefinitionsType">
<xs:sequence>
<xs:element name="Segmentation" type=" SegmentationType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: SegmentationType

Super-types: | xs:anyType < SegmentationType (by extension)
Sub-types: | None

Name | SegmentationType
Used by (from the same schema document) | Complex Type SegmentationDefinitionsType
Abstract | no

XML Instance Representation
<...
Id=" IDType [1]"
Description=" xs:string [0..1]">
<!-- ' xs:anyType' super type was not found in this schema. Some elements and attributes may be missing. -->
</...>
Diagram
Schema Component Representation
<xs:complexType name="SegmentationType">
<xs:complexContent>
<xs:extension base=" xs:anyType ">
<xs:attribute name="Id" type=" IDType " use="required"/>
<xs:attribute name="Description" type=" xs:string " use="optional"/>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: SitemapType

Super-types: | None
Sub-types: | None

Name | SitemapType
Used by (from the same schema document) | Complex Type ICEFormatType
Abstract | no

XML Instance Representation
<...>
Start Choice [1]
<Grid> GridType </Grid> [1]
<Position> PositionType </Position> [1]
End Choice
</...>
Diagram
Schema Component Representation
<xs:complexType name="SitemapType">
<xs:sequence>
<xs:choice>
<xs:element name="Grid" type=" GridType "/>
<xs:element name="Position" type=" PositionType "/>
</xs:choice>
</xs:sequence>
</xs:complexType>
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### Complex Type: StringFeatureInfo

Super-types: | BasicFeatureInfo < StringFeatureInfo (by extension)
Sub-types: | None

Name | StringFeatureInfo
Used by (from the same schema document) | Complex Type FeatureDefinitionType
Abstract | no

XML Instance Representation
<...>
<Description> xs:string </Description> [1]
<ID> IDType </ID> [1]
</...>
Diagram
Schema Component Representation
<xs:complexType name="StringFeatureInfo">
<xs:complexContent>
<xs:extension base=" BasicFeatureInfo ">
<xs:sequence>
<-- Not sure if anythink is needed here -->
</xs:sequence>
</xs:extension>
</xs:complexContent>
</xs:complexType>
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### Complex Type: TimedeltaType

Super-types: | None
Sub-types: | None

Name | TimedeltaType
Used by (from the same schema document) | Complex Type TimestampType
Abstract | no

XML Instance Representation
<...
Value=" xs:double [1]"
Unit=" TUnitsType [0..1]"/>
Diagram
Schema Component Representation
<xs:complexType name="TimedeltaType">
<xs:attribute name="Value" type=" xs:double " use="required"/>
<xs:attribute name="Unit" type=" TUnitsType " use="optional"/>
</xs:complexType>
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### Complex Type: TimestampType

Super-types: | None
Sub-types: | None

Name | TimestampType
Used by (from the same schema document) | Complex Type MetaDataType
Abstract | no

XML Instance Representation
<...>
Start All [1]
<Absolute> xs:dateTime </Absolute> [0..1]
<Relative> TimedeltaType </Relative> [0..1]
End All
</...>
Diagram
Schema Component Representation
<xs:complexType name="TimestampType">
<xs:all>
<xs:element name="Absolute" type=" xs:dateTime " minOccurs="0" maxOccurs="1"/>
<xs:element name="Relative" type=" TimedeltaType " minOccurs="0" maxOccurs="1"/>
</xs:all>
</xs:complexType>
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### Complex Type: WellType

Super-types: | None
Sub-types: | None

Name | WellType
Used by (from the same schema document) | Complex Type PlateType
Abstract | no

XML Instance Representation
<...>
<RowID> IDType </RowID> [1]
<ColumnID> IDType </ColumnID> [1]
<DataSet> DataSetType </DataSet> [1..*]
</...>
Diagram
Schema Component Representation
<xs:complexType name="WellType">
<xs:sequence>
<xs:element name="RowID" type=" IDType "/>
<xs:element name="ColumnID" type=" IDType "/>
<xs:element name="DataSet" type=" DataSetType " minOccurs="1" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
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### Complex Type: Z-positionType

Super-types: | None
Sub-types: | None

Name | Z-positionType
Used by (from the same schema document) | Complex Type MetaDataType
Abstract | no

XML Instance Representation
<...>
Start All [1]
<Absolute> Z-positionValueType </Absolute> [0..1]
<Relative> Z-positionValueType </Relative> [0..1]
End All
</...>
Diagram
Schema Component Representation
<xs:complexType name="Z-positionType">
<xs:all>
<xs:element name="Absolute" type=" Z-positionValueType " minOccurs="0" maxOccurs="1"/>
<xs:element name="Relative" type=" Z-positionValueType " minOccurs="0" maxOccurs="1"/>
</xs:all>
</xs:complexType>
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### Complex Type: Z-positionValueType

Super-types: | None
Sub-types: | None

Name | Z-positionValueType
Used by (from the same schema document) | Complex Type Z-positionType , Complex Type Z-positionType
Abstract | no

XML Instance Representation
<...
Value=" xs:double [1]"
Unit=" LUnitsType [0..1]"/>
Diagram
Schema Component Representation
<xs:complexType name="Z-positionValueType">
<xs:attribute name="Value" type=" xs:double " use="required"/>
<xs:attribute name="Unit" type=" LUnitsType " use="optional"/>
</xs:complexType>
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### Simple Type: IDType

Super-types: | xs:string < IDType (by restriction)
Sub-types: | None

Name | IDType
Used by (from the same schema document) | Complex Type ChannelType , Complex Type SegmentationType , Complex Type DataSetType , Complex Type ResourceType , Complex Type MaskType , Complex Type BasicFeatureInfo , Complex Type ImageFeatureInfo , Complex Type CompositeImageFeatureInfo , Complex Type CompositeImageFeatureInfo , Complex Type FeatureValue , Complex Type IndividualImageData , Complex Type PlateType , Complex Type WellType , Complex Type WellType , Complex Type GridSiteType , Complex Type PositionSiteType
Content | Base XSD Type: string length >= 1

Diagram
Schema Component Representation
<xs:simpleType name="IDType">
<xs:restriction base=" xs:string ">
<xs:minLength value="1"/>
</xs:restriction>
</xs:simpleType>
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### Simple Type: LUnitsOrPixelType

Super-types: | xs:string < LUnitsOrPixelType (by restriction)
Sub-types: | LUnitsType (by restriction)

Name | LUnitsOrPixelType
Used by (from the same schema document) | Complex Type PositionType
Content | Base XSD Type: string value comes from list: {'pixel'|'m'|'dm'|'cm'|'mm'|'um'|'nm'|'pm'}

Diagram
Schema Component Representation
<xs:simpleType name="LUnitsOrPixelType">
<xs:restriction base=" xs:string ">
<xs:enumeration value="pixel"/>
<xs:enumeration value="m"/>
<-- metre -->
<xs:enumeration value="dm"/>
<-- 10^-1 metre -->
<xs:enumeration value="cm"/>
<-- 10^-2 metre -->
<xs:enumeration value="mm"/>
<-- 10^-3 metre -->
<xs:enumeration value="um"/>
<-- 10^-6 metre -->
<xs:enumeration value="nm"/>
<-- 10^-9 metre -->
<xs:enumeration value="pm"/>
<-- 10^-12 metre -->
</xs:restriction>
</xs:simpleType>
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### Simple Type: LUnitsType

Super-types: | xs:string < LUnitsOrPixelType (by restriction) < LUnitsType (by restriction)
Sub-types: | None

Name | LUnitsType
Used by (from the same schema document) | Complex Type Z-positionValueType
Content | Base XSD Type: string value comes from list: {'pixel'|'m'|'dm'|'cm'|'mm'|'um'|'nm'|'pm'} value comes from list: {'m'|'dm'|'cm'|'mm'|'um'|'nm'|'pm'}

Diagram
Schema Component Representation
<xs:simpleType name="LUnitsType">
<xs:restriction base=" LUnitsOrPixelType ">
<xs:enumeration value="m"/>
<-- metre -->
<xs:enumeration value="dm"/>
<-- 10^-1 metre -->
<xs:enumeration value="cm"/>
<-- 10^-2 metre -->
<xs:enumeration value="mm"/>
<-- 10^-3 metre -->
<xs:enumeration value="um"/>
<-- 10^-6 metre -->
<xs:enumeration value="nm"/>
<-- 10^-9 metre -->
<xs:enumeration value="pm"/>
<-- 10^-12 metre -->
</xs:restriction>
</xs:simpleType>
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### Simple Type: PosInt

Super-types: | xs:int < PosInt (by restriction)
Sub-types: | None

Name | PosInt
Used by (from the same schema document) | Complex Type MetaDataType , Complex Type ImageType , Complex Type ImageType , Complex Type MaskType , Complex Type CustomPlateLayoutType , Complex Type CustomPlateLayoutType , Complex Type GridType , Complex Type GridType , Complex Type GridSiteType , Complex Type GridSiteType
Content | Base XSD Type: int value >= 1

Diagram
Schema Component Representation
<xs:simpleType name="PosInt">
<xs:restriction base=" xs:int ">
<xs:minInclusive value="1"/>
</xs:restriction>
</xs:simpleType>
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### Simple Type: StandardPlateLayoutType

Super-types: | xs:string < StandardPlateLayoutType (by restriction)
Sub-types: | None

Name | StandardPlateLayoutType
Used by (from the same schema document) | Complex Type PlateLayoutType
Content | Base XSD Type: string value comes from list: {'6 well plate'|'12 well plate'|'24 well plate'|'48 well plate'|'96 well plate'|'384 well plate'|'1536 well plate'}

Diagram
Schema Component Representation
<xs:simpleType name="StandardPlateLayoutType">
<xs:restriction base=" xs:string ">
<xs:enumeration value="6 well plate"/>
<xs:enumeration value="12 well plate"/>
<xs:enumeration value="24 well plate"/>
<xs:enumeration value="48 well plate"/>
<xs:enumeration value="96 well plate"/>
<xs:enumeration value="384 well plate"/>
<xs:enumeration value="1536 well plate"/>
</xs:restriction>
</xs:simpleType>
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### Simple Type: TUnitsType

Super-types: | xs:string < TUnitsType (by restriction)
Sub-types: | None

Name | TUnitsType
Used by (from the same schema document) | Complex Type TimedeltaType
Content | Base XSD Type: string value comes from list: {'s'|'ms'|'us'|'ns'|'ps'}

Diagram
Schema Component Representation
<xs:simpleType name="TUnitsType">
<xs:restriction base=" xs:string ">
<xs:enumeration value="s"/>
<-- second -->
<xs:enumeration value="ms"/>
<-- 10^-3 second -->
<xs:enumeration value="us"/>
<-- 10^-6 second -->
<xs:enumeration value="ns"/>
<-- 10^-9 second -->
<xs:enumeration value="ps"/>
<-- 10^-12 second -->
</xs:restriction>
</xs:simpleType>
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## Legend

### Complex Type:

Schema Component Type

### AusAddress

Schema Component Name

Super-types: | Address < AusAddress (by extension)
Sub-types: | QLDAddress (by restriction)

If this schema component is a type definition, its type hierarchy is shown in a gray-bordered box.

Name | AusAddress
Abstract | no

The table above displays the properties of this schema component.
XML Instance Representation
<... country="Australia" >
<unitNo> string </unitNo> [0..1]
<houseNo> string </houseNo> [1]
<street> string </street> [1]
Start Choice [1]
<city> string </city> [1]
<town> string </town> [1]
End Choice
<state> AusStates </state> [1]
<postcode> string <<pattern = [1-9][0-9]{3}>> </postcode> [1] ?
</...>

The XML Instance Representation table above shows the schema component's content as an XML instance.

- The minimum and maximum occurrence of elements and attributes are provided in square brackets, e.g. [0..1].
- Model group information are shown in gray, e.g. Start Choice ... End Choice.
- For type derivations, the elements and attributes that have been added to or changed from the base type's content are shown in bold.
- If an element/attribute has a fixed value, the fixed value is shown in green, e.g. country="Australia".
- Otherwise, the type of the element/attribute is displayed.
  - If the element/attribute's type is in the schema, a link is provided to it.
  - For local simple type definitions, the constraints are displayed in angle brackets, e.g. <<pattern = [1-9][0-9]{3}>>.
- If a local element/attribute has documentation, it will be displayed in a window that pops up when the question mark inside the attribute or next to the element is clicked, e.g. <postcode>.

Schema Component Representation
<complexType name="AusAddress">
<complexContent>
<extension base=" Address ">
<sequence>
<element name="state" type=" AusStates "/>
<element name="postcode">
<simpleType>
<restriction base=" string ">
<pattern value="[1-9][0-9]{3}"/>
</restriction>
</simpleType>
</element>
</sequence>
<attribute name="country" type=" string " fixed="Australia"/>
</extension>
</complexContent>
</complexType>
The Schema Component Representation table above displays the underlying XML representation of the schema component. (Annotations are not shown.)
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## Glossary

Abstract (Applies to complex type definitions and element declarations). An abstract element or complex type cannot used to validate an element instance. If there is a reference to an abstract element, only element declarations that can substitute the abstract element can be used to validate the instance. For references to abstract type definitions, only derived types can be used.

All Model Group Child elements can be provided in any order in instances. See: http://www.w3.org/TR/xmlschema-1/#element-all.

Choice Model Group Only one from the list of child elements and model groups can be provided in instances. See: http://www.w3.org/TR/xmlschema-1/#element-choice.

Collapse Whitespace Policy Replace tab, line feed, and carriage return characters with space character (Unicode character 32). Then, collapse contiguous sequences of space characters into single space character, and remove leading and trailing space characters.

Disallowed Substitutions (Applies to element declarations). If substitution is specified, then substitution group members cannot be used in place of the given element declaration to validate element instances. If derivation methods, e.g. extension, restriction, are specified, then the given element declaration will not validate element instances that have types derived from the element declaration's type using the specified derivation methods. Normally, element instances can override their declaration's type by specifying an `xsi:type` attribute.

Key Constraint Like Uniqueness Constraint, but additionally requires that the specified value(s) must be provided. See: http://www.w3.org/TR/xmlschema-1/#cIdentity-constraint_Definitions.

Key Reference Constraint Ensures that the specified value(s) must match value(s) from a Key Constraint or Uniqueness Constraint. See: http://www.w3.org/TR/xmlschema-1/#cIdentity-constraint_Definitions.

Model Group Groups together element content, specifying the order in which the element content can occur and the number of times the group of element content may be repeated. See: http://www.w3.org/TR/xmlschema-1/#Model_Groups.

Nillable (Applies to element declarations). If an element declaration is nillable, instances can use the `xsi:nil` attribute. The `xsi:nil` attribute is the boolean attribute, nil, from the http://www.w3.org/2001/XMLSchema-instance namespace. If an element instance has an `xsi:nil` attribute set to true, it can be left empty, even though its element declaration may have required content.

Notation A notation is used to identify the format of a piece of data. Values of elements and attributes that are of type, NOTATION, must come from the names of declared notations. See: http://www.w3.org/TR/xmlschema-1/#cNotation_Declarations.

Preserve Whitespace Policy Preserve whitespaces exactly as they appear in instances.

Prohibited Derivations (Applies to type definitions). Derivation methods that cannot be used to create sub-types from a given type definition.

Prohibited Substitutions (Applies to complex type definitions). Prevents sub-types that have been derived using the specified derivation methods from validating element instances in place of the given type definition.

Replace Whitespace Policy Replace tab, line feed, and carriage return characters with space character (Unicode character 32).

Sequence Model Group Child elements and model groups must be provided in the specified order in instances. See: http://www.w3.org/TR/xmlschema-1/#element-sequence.

Substitution Group Elements that are members of a substitution group can be used wherever the head element of the substitution group is referenced.

Substitution Group Exclusions (Applies to element declarations). Prohibits element declarations from nominating themselves as being able to substitute a given element declaration, if they have types that are derived from the original element's type using the specified derivation methods.

Target Namespace The target namespace identifies the namespace that components in this schema belongs to. If no target namespace is provided, then the schema components do not belong to any namespace.

Uniqueness Constraint Ensures uniqueness of an element/attribute value, or a combination of values, within a specified scope. See: http://www.w3.org/TR/xmlschema-1/#cIdentity-constraint_Definitions.

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